STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001972Transmembrane BAX inhibitor motif containing 4. (236 aa)    
Predicted Functional Partners:
ENSGMOP00000014675
LEM domain containing 3.
      
 0.516
ENSGMOP00000005711
Sigma non-opioid intracellular receptor 1.
      
 0.497
tmem147
Transmembrane protein 147.
   
  
 0.479
ENSGMOP00000007183
Reticulocalbin 2.
      
 0.463
ENSGMOP00000002834
Transmembrane protein 97.
      
 0.453
ENSGMOP00000011527
Zinc metallopeptidase, STE24 homolog.
  
  
 0.445
GHITM
Growth hormone inducible transmembrane protein.
   
  
 0.433
ENSGMOP00000003290
annotation not available
      
 0.416
ENSGMOP00000011424
annotation not available
      
 0.407
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.