STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002000Potassium channel tetramerization domain containing 7. (290 aa)    
Predicted Functional Partners:
CUL3
Cullin-3-like.
    
 0.729
ENSGMOP00000018480
Cullin 3b.
    
 0.729
KLHL11
Kelch like family member 11.
     
 0.672
ENSGMOP00000004304
Ubiquitin-conjugating enzyme E2F (putative).
    
  0.671
ube2m
Ubiquitin conjugating enzyme E2 M.
    
  0.671
ENSGMOP00000009592
annotation not available
 
      0.663
ENSGMOP00000009976
BTB (POZ) domain containing 6b.
    
 0.632
ENSGMOP00000015767
Copper metabolism (Murr1) domain containing 1.
     
 0.622
GAN
Gigaxonin.
    
  0.614
ENSGMOP00000002438
Kelch repeat and BTB (POZ) domain containing 8.
    
  0.614
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.