STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002034Solute carrier family 25 member 3b. (348 aa)    
Predicted Functional Partners:
atp5f1a
ATP synthase F1 subunit alpha.
   
 
 0.883
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
   
  
 0.878
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
   
 
 0.860
ENSGMOP00000002855
Ubiquinol-cytochrome c reductase core protein 2b.
   
  
 0.856
ENSGMOP00000003258
annotation not available
   
  
 0.826
ENSGMOP00000010823
ATP synthase F1 subunit beta.
   
  
 0.826
hagh
Hydroxyacylglutathione hydrolase.
   
 
 0.807
ENSGMOP00000017454
ATP synthase peripheral stalk subunit OSCP.
   
    0.798
COX5A
Cytochrome c oxidase subunit 5A.
   
  
 0.795
ENSGMOP00000020527
annotation not available
   
  
 0.795
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.