STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002103annotation not available (246 aa)    
Predicted Functional Partners:
ENSGMOP00000004838
annotation not available
   
 0.937
ENSGMOP00000021117
Fas ligand (TNF superfamily, member 6).
    
  0.872
ENSGMOP00000014913
Tumor necrosis factor b (TNF superfamily, member 2).
   
 0.828
ENSGMOP00000002228
annotation not available
   
 0.724
ENSGMOP00000019487
TNF receptor-associated factor 7.
    
 0.565
PDZRN4
PDZ domain containing ring finger 4.
    
 0.564
ENSGMOP00000007827
PDZ domain containing RING finger 3b.
    
 0.564
rnf41
Ring finger protein 41.
    
 0.564
ENSGMOP00000009024
annotation not available
    
 0.564
ENSGMOP00000010772
annotation not available
    
 0.564
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.