STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002114Solute carrier family 25 member 47. (296 aa)    
Predicted Functional Partners:
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
   0.906
ENSGMOP00000015147
Ribosomal protein L14.
   
 
 0.748
rpl8
Ribosomal protein L8.
   
 
 0.708
ENSGMOP00000012357
Ribosomal protein L6.
   
 
 0.706
rpl28
Ribosomal protein L28.
   
   0.699
ENSGMOP00000002892
Ribosomal protein L13.
   
   0.697
rps13
Ribosomal protein S13.
   
   0.695
ENSGMOP00000017872
Ribosomal protein S23.
   
 
 0.689
rps3
Ribosomal protein S3.
   
   0.686
ENSGMOP00000018650
Ribosomal protein S8a.
   
   0.685
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.