STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002160Murine retrovirus integration site 1 homolog. (683 aa)    
Predicted Functional Partners:
ENSGMOP00000003796
Inositol 1,4,5-trisphosphate receptor, type 2.
    
 0.882
ENSGMOP00000013618
Inositol 1,4,5-trisphosphate receptor, type 3.
    
 0.882
ENSGMOP00000012551
Protein kinase cGMP-dependent 1a.
   
 0.881
ENSGMOP00000015876
annotation not available
   
 0.881
ENSGMOP00000005330
annotation not available
    
  0.871
ENSGMOP00000005370
annotation not available
    
  0.871
ENSGMOP00000002470
Inositol 1,4,5-trisphosphate receptor, type 1b.
    
 0.869
ENSGMOP00000004735
Inositol 1,4,5-trisphosphate receptor, type 1a.
    
 0.869
ENSGMOP00000007551
Protein kinase cGMP-dependent 3.
   
 0.689
ENSGMOP00000009061
Protein kinase cGMP-dependent 2.
   
 0.689
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.