STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002202Methyltransferase like 1. (235 aa)    
Predicted Functional Partners:
ENSGMOP00000019530
WD repeat domain 4.
   
 0.999
ENSGMOP00000012179
tRNA methyltransferase 61A.
  
 
 0.937
ENSGMOP00000000324
SAGA complex associated factor 29.
    
 
 0.919
ENSGMOP00000018571
Dyskeratosis congenita 1, dyskerin.
  
 
 0.916
ENSGMOP00000017325
Transcriptional adaptor 2A.
    
 
 0.915
ENSGMOP00000001009
TruB pseudouridine (psi) synthase family member 2.
  
 
 0.910
ENSGMOP00000011834
tRNA methyltransferase 6.
   
  
 0.908
ENSGMOP00000000866
tRNA methyltransferase 10A.
   
 
 0.907
ENSGMOP00000001815
tRNA methyltransferase 61B.
  
 
 0.904
ENSGMOP00000011012
DEAD (Asp-Glu-Ala-Asp) box polypeptide 47.
  
 
 0.887
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.