STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002228annotation not available (124 aa)    
Predicted Functional Partners:
ENSGMOP00000015220
TNF receptor-associated factor 6.
    
 0.979
ENSGMOP00000009024
annotation not available
    
 0.908
ENSGMOP00000012153
Tnf receptor-associated factor 2b.
    
 0.908
TRAF2
TNF receptor associated factor 2.
    
 0.908
ENSGMOP00000015237
TNF receptor-associated factor 3.
    
 0.887
TNFSF10
TNF superfamily member 10.
     
 0.782
ENSGMOP00000002103
annotation not available
   
 0.724
ENSGMOP00000005779
annotation not available
   
 0.700
PDZRN4
PDZ domain containing ring finger 4.
    
 0.694
ENSGMOP00000007827
PDZ domain containing RING finger 3b.
    
 0.694
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.