STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl23Ribosomal protein L23. (140 aa)    
Predicted Functional Partners:
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.999
ENSGMOP00000009150
Mitochondrial ribosomal protein L16.
  
 0.997
ENSGMOP00000012827
Ribosomal protein L11.
  
 0.997
rpl35
Ribosomal protein L35.
  
 0.997
rpl8
Ribosomal protein L8.
  
 0.997
ENSGMOP00000014634
Mitochondrial ribosomal protein L22.
  
 0.997
ENSGMOP00000001035
Ribosomal protein L9.
  
 0.996
ENSGMOP00000002892
Ribosomal protein L13.
   
 0.996
ENSGMOP00000003830
Ribosomal protein L24.
   
 0.996
RPL27A
Ribosomal protein L27a.
  
 0.996
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.