STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115537069Protein transport protein Sec61 subunit gamma; Necessary for protein translocation in the endoplasmic reticulum. (68 aa)    
Predicted Functional Partners:
sec61b
SEC61 translocon beta subunit.
   
 0.997
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.996
ENSGMOP00000001097
SEC63 homolog, protein translocation regulator.
    
 
 0.967
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 0.965
ENSGMOP00000009929
SEC61 translocon alpha 1 subunit, like.
   
 0.965
ENSGMOP00000013419
SEC62 homolog, preprotein translocation factor.
    
 
 0.947
rps2
Ribosomal protein S2.
   
  0.942
rpl39
Ribosomal protein L39.
   
   0.934
ddost
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
   
 0.934
ENSGMOP00000012083
Ribophorin I.
   
 0.929
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.