STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002291Scavenger receptor class F, member 1. (738 aa)    
Predicted Functional Partners:
ENSGMOP00000000339
annotation not available
    
 0.641
ENSGMOP00000010682
Complement component 6.
   
  0.638
ENSGMOP00000013744
CD59 molecule (CD59 blood group).
   
 0.579
ENSGMOP00000007640
annotation not available
    
  0.532
ENSGMOP00000010283
annotation not available
    
  0.532
ENSGMOP00000010292
annotation not available
    
  0.532
ENSGMOP00000010370
annotation not available
    
  0.532
ENSGMOP00000011189
annotation not available
    
  0.532
ENSGMOP00000015741
Transthyretin (prealbumin, amyloidosis type I).
   
  
 0.530
ENSGMOP00000006305
annotation not available
   
 0.527
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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