STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL6LHFPL tetraspan subfamily member 6. (198 aa)    
Predicted Functional Partners:
ENSGMOP00000001927
Dachsous cadherin-related 1a.
   
 0.541
ENSGMOP00000000314
annotation not available
   
  
 0.526
ENSGMOP00000002510
Component of oligomeric golgi complex 6.
      
 0.524
ENSGMOP00000002219
annotation not available
   
 0.510
ENSGMOP00000000637
annotation not available
   
 0.490
ENSGMOP00000006178
annotation not available
      
 0.489
ENSGMOP00000006363
annotation not available
      
 0.465
ENSGMOP00000010518
annotation not available
   
 0.442
ENSGMOP00000011360
Si:dkey-1m11.6.
   
 0.442
ENSGMOP00000002991
Zgc:92907.
      
 0.424
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.