STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002617Uroporphyrinogen III synthase. (261 aa)    
Predicted Functional Partners:
ENSGMOP00000011736
Hydroxymethylbilane synthase, b.
  
 0.996
ENSGMOP00000010960
Aminolevulinate dehydratase.
  
 0.992
ENSGMOP00000005014
Uroporphyrinogen decarboxylase.
  
 
 0.944
ENDOV
Endonuclease V.
  
 
 0.925
ENSGMOP00000001067
Iodotyrosine deiodinase.
  
 
 0.914
ENSGMOP00000006924
Protoporphyrinogen oxidase.
  
 
 0.884
ENSGMOP00000013483
Ferrochelatase.
  
  
 0.703
ENSGMOP00000014862
Coproporphyrinogen oxidase.
     
 0.664
ENSGMOP00000016778
Transcription termination factor, RNA polymerase II.
  
  
 0.646
pcna
Proliferating cell nuclear antigen.
     
 0.633
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.