STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002641Neuronal pentraxin 2a. (448 aa)    
Predicted Functional Partners:
ENSGMOP00000009660
Ring finger protein 2.
    
 0.819
RING1
Ring finger protein 1.
    
 0.819
ENSGMOP00000017766
Embryonic ectoderm development.
    
 0.692
ENSGMOP00000013561
Polycomb group ring finger 6.
    
 0.627
PCGF3
Polycomb group ring finger 3.
    
 0.627
ENSGMOP00000013882
annotation not available
    
 0.627
ENSGMOP00000015309
Bmi1 polycomb ring finger oncogene 1a.
    
 0.627
ENSGMOP00000017240
Polycomb group ring finger 1.
    
 0.627
ENSGMOP00000018917
Polycomb group ring finger 5a.
    
 0.627
ENSGMOP00000012786
SUZ12 polycomb repressive complex 2 subunit b.
     
 0.562
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.