STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002649Charged multivesicular body protein 4C. (228 aa)    
Predicted Functional Partners:
ENSGMOP00000010580
Protein tyrosine phosphatase, non-receptor type 23, a.
   
 0.988
ENSGMOP00000011105
Programmed cell death 6 interacting protein.
   
 0.983
chmp3
Charged multivesicular body protein 3.
   
 0.980
chmp2a
Charged multivesicular body protein 2A.
   
 0.974
ENSGMOP00000003904
Charged multivesicular body protein 1A.
    
 0.964
ENSGMOP00000017864
Charged multivesicular body protein 6a.
    
 0.963
ENSGMOP00000020970
Charged multivesicular body protein 6b.
    
 0.963
ENSGMOP00000010165
Charged multivesicular body protein 7.
    
 0.956
ENSGMOP00000005111
annotation not available
    
 0.942
LOC115549536
Charged multivesicular body protein 5-like.
  
 0.938
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.