STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002736Transient receptor potential cation channel, subfamily C, member 1. (783 aa)    
Predicted Functional Partners:
ENSGMOP00000001632
Transient receptor potential cation channel, subfamily C, member 4b.
  
 
0.892
ENSGMOP00000013198
Transient receptor potential cation channel, subfamily C, member 4a.
  
 
0.892
ENSGMOP00000016498
annotation not available
    
0.890
ENSGMOP00000003924
Bone morphogenetic protein receptor, type II a (serine/threonine kinase).
   
 0.868
ENSGMOP00000007780
Stromal interaction molecule 1a.
    
 0.856
ENSGMOP00000005211
Tromal interaction molecule 2a.
    
 0.821
ENSGMOP00000019049
Stromal interaction molecule 2b.
    
 0.821
TRPC6
Transient receptor potential cation channel subfamily C member 6.
  
 
0.813
TRPC6-2
Transient receptor potential cation channel subfamily C member 6.
  
 
0.812
ENSGMOP00000021114
Transient receptor potential cation channel, subfamily C, member 7b.
  
 
0.808
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.