STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002761annotation not available (330 aa)    
Predicted Functional Partners:
ENSGMOP00000002742
Ubiquitin protein ligase E3 component n-recognin 3.
 
     0.921
ENSGMOP00000006481
HECT domain containing 1.
   
  
 0.752
ENSGMOP00000007861
Thyroid hormone receptor interactor 12.
   
 
  0.586
CUL5
Cullin 5.
   
    0.574
ENSGMOP00000015512
annotation not available
   
    0.574
ENSGMOP00000006128
Ovo-like zinc finger 1a.
    
 
 0.461
ube2a
Ubiquitin conjugating enzyme E2 A.
    
 
 0.453
ENSGMOP00000003535
annotation not available
    
 
 0.453
ATE1
Arginyltransferase 1.
   
  
 0.421
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.