STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002891annotation not available (130 aa)    
Predicted Functional Partners:
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.917
ENSGMOP00000005282
annotation not available
   
  0.669
ENSGMOP00000006173
ATRX chromatin remodeler.
   
  0.669
ENSGMOP00000011642
Centromere protein N.
    
 0.641
ENSGMOP00000005357
Centromere protein I.
    
 0.630
ENSGMOP00000005836
annotation not available
    
  0.624
ENSGMOP00000016863
Centromere protein K.
    
  0.624
ENSGMOP00000019637
WD repeat domain 18.
   
 0.624
ENSGMOP00000013261
Ribosomal protein S14.
   
  0.620
ENSGMOP00000012743
Rhomboid, veinlet-like 3 (Drosophila).
    
  0.618
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.