STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002966annotation not available (240 aa)    
Predicted Functional Partners:
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.886
ENSGMOP00000000977
Fras1 related extracellular matrix 1a.
    
 0.721
ENSGMOP00000018834
Fras1 related extracellular matrix 1b.
    
 0.721
ENSGMOP00000006580
Fraser extracellular matrix complex subunit 1.
    
  0.716
ENSGMOP00000020746
annotation not available
    
 0.706
ASF1B
Histone chaperone asf1b-B.
    
 0.642
rps28
Ribosomal protein S28.
   
   0.637
ENSGMOP00000013261
Ribosomal protein S14.
   
 
 0.636
ENSGMOP00000005457
Si:dkey-159f12.2.
   
 
 0.624
ENSGMOP00000007553
RAN binding protein 2.
   
 
  0.616
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.