STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000002988TWIST neighbor. (254 aa)    
Predicted Functional Partners:
polr2l
RNA polymerase II subunit L.
   
 0.999
ENSGMOP00000002436
RNA polymerase I subunit A.
   
 0.999
POLR1E
RNA polymerase I subunit E.
   
 0.999
ENSGMOP00000006231
RNA polymerase I subunit B.
   
 0.999
POLR2E
RNA polymerase II subunit E.
   
 0.999
ENSGMOP00000009070
Zinc ribbon domain containing 1.
   
 0.999
ENSGMOP00000010651
RRN3 homolog, RNA polymerase I transcription factor.
   
 0.999
ENSGMOP00000010653
Polymerase (RNA) II (DNA directed) polypeptide F.
   
 0.999
ENSGMOP00000014826
RNA polymerase I and III subunit C.
   
 0.999
ENSGMOP00000020587
annotation not available
   
 0.998
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.