STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003009Solute carrier family 13 member 5a. (442 aa)    
Predicted Functional Partners:
ENSGMOP00000006953
malonyl-CoA decarboxylase.
    
 0.704
ENSGMOP00000000885
Solute carrier family 1 member 1.
    
 0.472
ENSGMOP00000005139
Coiled-coil domain containing 77.
    
 0.472
ENSGMOP00000007152
Solute carrier family 1 member 6.
    
 0.472
slc1a2
Solute carrier family 1 member 2.
    
 0.472
SLC1A3
Solute carrier family 1 member 3.
    
 0.472
ENSGMOP00000009873
annotation not available
    
 0.472
ENSGMOP00000010029
Solute carrier family 1 member 3a.
    
 0.472
ENSGMOP00000010635
Solute carrier family 1 member 4.
    
 0.472
ENSGMOP00000011446
Solute carrier family 1 member 7b.
    
 0.472
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.