STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003170FERM domain containing 8. (437 aa)    
Predicted Functional Partners:
ENSGMOP00000012012
Integrin beta 1 binding protein 1.
    
 
 0.878
ENSGMOP00000001217
Si:dkey-27j5.5.
    
  0.523
rrad
RRAD, Ras related glycolysis inhibitor and calcium channel regulator.
    
  0.523
ENSGMOP00000001361
RAS related 2.
    
  0.523
LOC115561779
Beta-crystallin B1-like.
    
  0.523
ENSGMOP00000002589
RAS-like, family 11, member B.
    
  0.523
LOC115552388
Ras-related protein Rap-2c.
    
  0.523
ENSGMOP00000003093
annotation not available
    
  0.523
RALB
RAS like proto-oncogene B.
    
  0.523
ENSGMOP00000004758
RAS related.
    
  0.523
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.