STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003238ADAM metallopeptidase domain 8b. (719 aa)    
Predicted Functional Partners:
ENSGMOP00000000516
RAS p21 protein activator (GTPase activating protein) 1a.
    
  0.539
ENSGMOP00000009403
SH3 and PX domains 2Aa.
    
 0.510
ENSGMOP00000017660
SH3 and PX domains 2B.
    
 0.510
ENSGMOP00000020591
annotation not available
    
  0.477
ENSGMOP00000020597
annotation not available
    
  0.477
ENSGMOP00000001128
annotation not available
 
   
  0.468
ENSGMOP00000005861
NADPH oxidase organizer 1b.
   
  0.434
ENSGMOP00000010528
Leucine-rich repeat LGI family, member 2a.
     
 0.434
ENSGMOP00000012389
NADPH oxidase organizer 1a.
   
  0.434
ENSGMOP00000013367
Leucine-rich repeat LGI family, member 2b.
     
 0.434
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.