STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003257Si:ch211-195d17.2. (297 aa)    
Predicted Functional Partners:
ENSGMOP00000012364
Transcription factor Dp-1, a.
   
 0.963
ENSGMOP00000014365
L3MBTL histone methyl-lysine binding protein 2.
    
 0.920
ENSGMOP00000007878
RING1 and YY1 binding protein b.
   
 0.908
ENSGMOP00000009660
Ring finger protein 2.
    
 0.903
ENSGMOP00000013561
Polycomb group ring finger 6.
    
 0.903
RING1
Ring finger protein 1.
    
 0.903
ENSGMOP00000017240
Polycomb group ring finger 1.
    
 0.903
YAF2
YY1 associated factor 2.
   
 0.885
ENSGMOP00000009925
Mbt domain containing 1.
    
 0.885
ENSGMOP00000017348
annotation not available
    
 0.885
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.