STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdk5Cyclin dependent kinase 5. (292 aa)    
Predicted Functional Partners:
ENSGMOP00000019920
Cyclin-dependent kinase 5, regulatory subunit 1a (p35).
    
 0.998
ENSGMOP00000000276
annotation not available
    
 0.942
ENSGMOP00000004930
annotation not available
    
 0.942
ENSGMOP00000015869
annotation not available
    
 0.942
ENSGMOP00000008291
Tumor protein p53.
    
 0.849
ENSGMOP00000002781
C2 calcium dependent domain containing 5.
    
 
 0.827
ENSGMOP00000004062
annotation not available
    
 0.816
ENSGMOP00000012155
Cdk5 and Abl enzyme substrate 1.
    
 0.816
ENSGMOP00000014123
annotation not available
    
 0.816
CABLES2
Cdk5 and Abl enzyme substrate 2.
    
 0.816
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.