STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003313Twist3. (190 aa)    
Predicted Functional Partners:
ENSGMOP00000007675
annotation not available
     
 0.871
ENSGMOP00000002930
Twist family bHLH transcription factor 1a.
  
 
 
0.788
ENSGMOP00000004453
annotation not available
    
 
 0.677
ENSGMOP00000009555
Transcription factor 3b.
    
 
 0.677
ENSGMOP00000013073
Transcription factor 3a.
    
 
 0.677
ENSGMOP00000016881
Transcription factor 12.
    
 
 0.677
TCF4
Transcription factor 4.
    
 
 0.677
ENSGMOP00000015684
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
 
 0.658
ENSGMOP00000018026
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
 
 0.658
ENSGMOP00000020347
annotation not available
   
 
 0.658
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.