STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003405annotation not available (160 aa)    
Predicted Functional Partners:
ENSGMOP00000002556
FA complementation group L.
    
  0.651
ENSGMOP00000008311
FA complementation group C.
    
  0.651
ENSGMOP00000019954
FA complementation group F.
    
  0.651
ENSGMOP00000005194
annotation not available
    
  0.593
ENSGMOP00000005204
annotation not available
    
  0.593
ENSGMOP00000008783
Ribosomal protein L10a.
    
  0.589
ENSGMOP00000008787
FA complementation group E.
    
  0.589
LOC115535534
Nuclear transport factor 2-like.
    
  0.587
ENSGMOP00000003809
annotation not available
    
  0.587
ENSGMOP00000000774
Mitochondrial ribosomal protein L1.
    
  0.569
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.