STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003447Signal recognition particle 19. (128 aa)    
Predicted Functional Partners:
LOC115543824
Signal recognition particle 14 kDa protein-like.
   
 0.999
ENSGMOP00000003760
Signal recognition particle 9.
   
 0.999
ENSGMOP00000012182
Signal recognition particle 54.
   
 0.999
ENSGMOP00000018896
Signal recognition particle 68.
    
 0.999
ENSGMOP00000006369
Signal recognition particle 72.
    
 0.998
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.994
ENSGMOP00000014172
SRP receptor subunit alpha.
   
 
 0.964
ENSGMOP00000002221
SRP receptor subunit beta.
   
 
 0.954
ENSGMOP00000015972
Ribosomal protein L23a.
   
 0.946
RPL19
Ribosomal protein L19.
   
 0.943
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.