STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003547RAD21 cohesin complex component a. (643 aa)    
Predicted Functional Partners:
ENSGMOP00000015817
Structural maintenance of chromosomes 3.
   
 0.999
ENSGMOP00000003692
Structural maintenance of chromosomes 1B.
   
 0.996
smc1a
Structural maintenance of chromosomes 1A.
   
 0.996
ENSGMOP00000001129
PDS5 cohesin associated factor A.
   
 0.985
ENSGMOP00000005521
PDS5 cohesin associated factor B.
   
 0.985
ENSGMOP00000003415
Stromal antigen 2b.
   
 0.984
ENSGMOP00000013794
annotation not available
   
 0.984
ENSGMOP00000013798
annotation not available
   
 0.984
ENSGMOP00000013818
Stromal antigen 1a.
   
 0.984
NIPBL
NIPBL cohesin loading factor.
   
 0.980
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.