STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003604Piezo-type mechanosensitive ion channel component 1. (1448 aa)    
Predicted Functional Partners:
ENSGMOP00000013182
annotation not available
 
      0.899
ENSGMOP00000017641
annotation not available
    
 0.884
ENSGMOP00000013790
ATR serine/threonine kinase.
   
 0.875
ENSGMOP00000002771
Minichromosome maintenance complex component 4.
   
 0.818
ENSGMOP00000018711
WD repeat and HMG-box DNA binding protein 1.
   
 
 0.784
cdc45
Cell division cycle 45.
    
 0.782
ENSGMOP00000002090
Timeless circadian clock.
    
 
 0.732
ENSGMOP00000019190
Cell division cycle 6 homolog (S. cerevisiae).
   
 0.721
ENSGMOP00000012492
Minichromosome maintenance complex component 2.
   
 0.716
ENSGMOP00000013821
Minichromosome maintenance 9 homologous recombination repair factor.
   
 0.716
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.