STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003709Microfibril associated protein 1. (439 aa)    
Predicted Functional Partners:
ENSGMOP00000003179
Zinc finger, matrin-type 2.
   
 0.998
ENSGMOP00000012171
pre-mRNA processing factor 38A.
   
 0.998
TCERG1
Transcription elongation regulator 1.
   
 0.996
ENSGMOP00000016770
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
   
 0.995
ENSGMOP00000005677
PRP31 pre-mRNA processing factor 31 homolog (yeast).
   
 0.992
ENSGMOP00000002222
pre-mRNA processing factor 8.
   
 
 0.990
ENSGMOP00000007216
Splicing factor 3b, subunit 1.
   
 
 0.989
ENSGMOP00000017187
Splicing factor 3a, subunit 1.
   
 
 0.988
ENSGMOP00000015022
PRP4 pre-mRNA processing factor 4 homolog (yeast).
   
  0.987
ENSGMOP00000005227
Small nuclear ribonucleoprotein 200 (U5).
   
 
 0.986
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.