STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003763Si:ch1073-396h14.1. (659 aa)    
Predicted Functional Partners:
ENSGMOP00000004558
ADAM metallopeptidase domain 10b.
  
  
0.701
ENSGMOP00000016660
ADAM metallopeptidase domain 10a.
  
  
0.700
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.681
ENSGMOP00000001570
annotation not available
    
 0.681
ENSGMOP00000017202
TIMP metallopeptidase inhibitor 2b.
    
 0.681
ENSGMOP00000007248
Heparin-binding EGF-like growth factor a.
     
 0.679
ENSGMOP00000004512
Rhomboid 5 homolog 1a (Drosophila).
    
 0.567
ENSGMOP00000019023
annotation not available
    
 0.567
ENSGMOP00000019285
annotation not available
    
 0.567
ENSGMOP00000011372
Si:dkey-21a6.5.
    
  0.563
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.