STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003784Aminolevulinate, delta-, synthase 1. (622 aa)    
Predicted Functional Partners:
ENSGMOP00000010960
Aminolevulinate dehydratase.
    
 0.926
ENSGMOP00000006691
Sarcosine dehydrogenase.
  
 
 0.894
SHMT2
Serine hydroxymethyltransferase 2.
  
 
 0.882
ENSGMOP00000003437
Glycine dehydrogenase (decarboxylating).
  
 
 0.881
ENSGMOP00000019008
Threonine aldolase 1.
  
 
 0.877
ENSGMOP00000009940
Glycine C-acetyltransferase.
  
  
 
0.866
LOC115555125
Serine--pyruvate aminotransferase-like.
    
 0.865
ENSGMOP00000011257
Alanine--glyoxylate and serine--pyruvate aminotransferase b.
    
 0.865
ENSGMOP00000002447
Serine hydroxymethyltransferase 1 (soluble).
  
 
 0.859
ENSGMOP00000008499
Serine hydroxymethyltransferase 2 (mitochondrial).
  
 
 0.859
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.