STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003845annotation not available (1002 aa)    
Predicted Functional Partners:
ENSGMOP00000012733
Ribosomal protein S27a.
    
 0.754
ENSGMOP00000008109
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.749
ENSGMOP00000000253
annotation not available
    
 0.701
ENSGMOP00000006042
UEV and lactate/malate dehyrogenase domains.
   
 0.700
ENSGMOP00000006687
annotation not available
   
 0.674
ENSGMOP00000007861
Thyroid hormone receptor interactor 12.
   
 
 0.670
ENSGMOP00000018766
annotation not available
    
 0.657
ENSGMOP00000004325
NEDD8 ubiquitin like modifier, like.
    
 0.645
ENSGMOP00000007083
Zinc finger, AN1-type domain 4.
   
 0.645
ENSGMOP00000018773
annotation not available
    
 0.625
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.