STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003871RAB3 GTPase activating protein subunit 1. (937 aa)    
Predicted Functional Partners:
ENSGMOP00000017678
RAB3 GTPase activating protein subunit 2 (non-catalytic).
   
 0.999
ENSGMOP00000002941
RAB18A, member RAS oncogene family.
    
 0.827
ENSGMOP00000017830
RAB18B, member RAS oncogene family.
    
 0.827
ENSGMOP00000011622
Solute carrier family 38 member 6.
   
    0.792
ENSGMOP00000010132
TBC1 domain family, member 31.
   
 
 0.769
ENSGMOP00000006058
annotation not available
   
 
 0.753
dctn4
Dynactin subunit 4.
   
 
  0.709
dctn5
Dynactin subunit 5.
   
 
  0.682
ENSGMOP00000018798
Actin related protein 1, centractin.
     
 0.681
ENSGMOP00000013130
Nocturnin a.
   
    0.679
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.