STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000003938annotation not available (470 aa)    
Predicted Functional Partners:
RAB7A
RAB7A, member RAS oncogene family.
    
 0.833
LOC115556538
Ras-related protein rab7.
    
 0.833
ENSGMOP00000012232
Motile sperm domain containing 2.
    
 
 0.687
ENSGMOP00000017488
annotation not available
    
 
 0.650
ADRM1
Adhesion regulating molecule 1.
 
    
 0.615
ENSGMOP00000002240
Rab interacting lysosomal protein.
   
 0.611
ENSGMOP00000012991
annotation not available
   
 0.587
RILPL1
Rab interacting lysosomal protein like 1.
   
 0.587
ENSGMOP00000005135
Adhesion regulating molecule 1.
 
    
 0.498
ENSGMOP00000013246
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 
 0.488
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.