STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004006annotation not available (91 aa)    
Predicted Functional Partners:
ENSGMOP00000009795
Notch receptor 3.
    
  0.797
ENSGMOP00000011291
annotation not available
    
  0.796
DTX1
Deltex E3 ubiquitin ligase 1.
  
  
0.698
ENSGMOP00000004909
annotation not available
    
  0.676
ENSGMOP00000018151
Notch receptor 1a.
    
  0.676
ENSGMOP00000005265
annotation not available
    
  0.545
ENSGMOP00000005289
annotation not available
    
  0.545
ENSGMOP00000008862
Zgc:66440.
  
  
 
0.533
ENSGMOP00000017878
Deltex 4, E3 ubiquitin ligase a.
  
 
 
0.518
ENSGMOP00000012733
Ribosomal protein S27a.
    
  0.506
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.