STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004029Bicaudal D homolog 1a. (800 aa)    
Predicted Functional Partners:
ENSGMOP00000008562
Dynactin 2 (p50).
    
 0.885
ENSGMOP00000014730
Dynactin 1a.
    
 0.833
ENSGMOP00000015372
Dynactin 1b.
    
 0.833
ENSGMOP00000001403
Dynein, cytoplasmic 1, light intermediate chain 2.
    
 0.830
ENSGMOP00000018238
Dynein, cytoplasmic 1, light intermediate chain 1.
    
 0.830
ENSGMOP00000002479
Dynein, cytoplasmic 1, intermediate chain 2a.
    
  0.782
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
    
  0.782
ENSGMOP00000020314
Dynein, cytoplasmic 1, intermediate chain 2b.
    
  0.782
ENSGMOP00000007082
Family with sequence similarity 193 member B.
    
 0.781
ENSGMOP00000003675
annotation not available
    
 0.759
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.