STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004039GATA binding protein 5. (325 aa)    
Predicted Functional Partners:
ENSGMOP00000016461
NK2 homeobox 5.
   
 0.893
lmo2
LIM domain only 2.
    
 0.821
ENSGMOP00000003969
Nuclear factor of activated T cells 2a.
   
 0.819
ENSGMOP00000000511
Sequestosome 1.
    
 0.812
ENSGMOP00000011689
Nuclear factor of activated T cells 4.
     
 0.808
ENSGMOP00000018290
Nuclear factor of activated T cells 3a.
   
 0.801
ENSGMOP00000005981
Zinc finger protein, FOG family member 2a.
    
 0.798
ENSGMOP00000002508
annotation not available
   
 0.796
ENSGMOP00000001614
annotation not available
    
 0.793
ENSGMOP00000009498
Serum response factor b.
    
 0.793
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.