STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004109succinyl-CoA:glutarate-CoA transferase. (358 aa)    
Predicted Functional Partners:
ENSGMOP00000010080
annotation not available
  
 0.927
ENSGMOP00000016813
Mitochondrial trans-2-enoyl-CoA reductase.
  
 
 0.926
ENSGMOP00000018983
acyl-CoA oxidase 1, palmitoyl.
  
 
 0.916
ENSGMOP00000019735
glutaryl-CoA dehydrogenase b.
 
 
 0.886
ENSGMOP00000017732
annotation not available
  
 
 0.872
ENSGMOP00000004564
2-hydroxyacyl-CoA lyase 1.
  
 
 0.868
ENSGMOP00000014142
ilvB (bacterial acetolactate synthase)-like.
  
 
 0.868
ENSGMOP00000010004
succinate-CoA ligase, alpha subunit.
   
  0.866
ENSGMOP00000007477
Carbonyl reductase 4.
  
 0.863
ENSGMOP00000001067
Iodotyrosine deiodinase.
  
 
 0.854
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.