STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004120Transient receptor potential cation channel, subfamily V, member 6. (709 aa)    
Predicted Functional Partners:
ENSGMOP00000016504
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.878
ENSGMOP00000007316
Calmodulin 2a (phosphorylase kinase, delta).
    
 
 0.821
calm1
Calmodulin 1.
    
 
 0.821
CALML3
Calmodulin like 3.
    
 
 0.821
ENSGMOP00000020594
annotation not available
    
 
 0.821
LOC115548285
cAMP-dependent protein kinase catalytic subunit beta.
    
 0.756
LOC115530003
cAMP-dependent protein kinase catalytic subunit alpha.
    
 0.756
ENSGMOP00000011484
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.
    
 0.756
prkacb
Protein kinase cAMP-activated catalytic subunit beta.
    
 0.756
ENSGMOP00000002207
annotation not available
    
  0.695
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.