STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004132Carbonic anhydrase VI. (492 aa)    
Predicted Functional Partners:
ENSGMOP00000002662
Ribosome production factor 2 homolog.
   
 
 0.700
ENSGMOP00000012827
Ribosomal protein L11.
    
 
 0.625
RPL5
Ribosomal protein L5.
    
 
 0.597
RPL5-2
Ribosomal protein L5.
    
 
 0.597
ENSGMOP00000003643
Peter pan homolog.
   
    0.592
ENSGMOP00000005268
Glutamate-rich WD repeat containing 1.
   
  
 0.556
ENSGMOP00000001794
WD repeat domain 43.
   
    0.540
ENSGMOP00000017264
GTP binding protein 4.
   
    0.529
ENSGMOP00000000681
NOC2-like nucleolar associated transcriptional repressor.
   
    0.524
ENSGMOP00000010030
WD repeat domain 36.
   
    0.524
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.