STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004256Deoxyribonuclease I-like 1-like. (295 aa)    
Predicted Functional Partners:
ENSGMOP00000006581
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.792
ENSGMOP00000009117
SIN3 transcription regulator family member Ab.
    
 0.751
ENSGMOP00000009882
SIN3 transcription regulator family member Aa.
    
 0.751
ENSGMOP00000014618
SIN3 transcription regulator family member B.
    
 0.751
ENSGMOP00000003084
Tnfrsf1a-associated via death domain.
     
 0.682
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.678
ENSGMOP00000006411
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.678
ENSGMOP00000012404
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.678
ENSGMOP00000015833
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.678
ENSGMOP00000018256
TANK-binding kinase 1.
    
 0.678
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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