STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004300Iroquois homeobox 7. (308 aa)    
Predicted Functional Partners:
ENSGMOP00000012508
annotation not available
   
 
 0.582
ENSGMOP00000002914
annotation not available
    
 0.578
ENSGMOP00000000298
Teashirt zinc finger homeobox 3b.
   
 0.562
ENSGMOP00000019887
Teashirt zinc finger homeobox 3a.
   
 0.562
TSHZ1
Teashirt zinc finger homeobox 1.
    
 0.561
ENSGMOP00000006833
annotation not available
    
 0.545
ENSGMOP00000007733
pre-B-cell leukemia homeobox 2.
    
 0.545
ENSGMOP00000008163
pre-B-cell leukemia homeobox 1b.
    
 0.545
ENSGMOP00000009955
pre-B-cell leukemia transcription factor 4.
    
 0.545
ENSGMOP00000010893
pre-B-cell leukemia homeobox 1a.
    
 0.545
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.