STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004308Aryl hydrocarbon receptor nuclear translocator-like 2. (374 aa)    
Predicted Functional Partners:
ENSGMOP00000013194
Neuronal PAS domain protein 2.
   
0.966
ENSGMOP00000005129
Clock circadian regulator b.
   
0.964
ENSGMOP00000017228
Cryptochrome circadian regulator 2.
   
 0.912
ENSGMOP00000011680
Cryptochrome DASH.
   
 0.897
ENSGMOP00000002345
Si:ch1073-390k14.1.
   
 0.895
ENSGMOP00000002236
Casein kinase 1, delta b.
    
 0.894
ENSGMOP00000010715
annotation not available
    
 0.894
ENSGMOP00000018712
Cryptochrome circadian regulator 5.
   
 0.881
ENSGMOP00000001134
Cryptochrome circadian regulator 1b.
   
 0.880
ENSGMOP00000011001
Period circadian clock 2.
    
0.874
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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