STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004325NEDD8 ubiquitin like modifier, like. (81 aa)    
Predicted Functional Partners:
ENSGMOP00000021900
SUMO peptidase family member, NEDD8 specific.
    
 0.998
ENSGMOP00000011181
UBX domain protein 7.
    
 0.996
ENSGMOP00000013181
Myb-like, SWIRM and MPN domains 1.
   
 0.996
ENSGMOP00000002178
Ring-box 1, E3 ubiquitin protein ligase.
   
 0.994
ENSGMOP00000001378
Nedd8 activating enzyme E1 subunit 1.
   
 0.990
ENSGMOP00000018264
COP9 signalosome subunit 5.
   
 0.989
COPS6
COP9 signalosome subunit 6.
   
 0.989
ENSGMOP00000019021
Cullin 2.
    
 0.987
ENSGMOP00000009035
G protein pathway suppressor 1.
   
 0.983
ENSGMOP00000008109
Ubiquitin A-52 residue ribosomal protein fusion product 1.
  
0.981
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.