STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004389Ankyrin repeat and SOCS box-containing 12b. (316 aa)    
Predicted Functional Partners:
ENSGMOP00000005734
Elongin C paralog a.
    
 0.747
ENSGMOP00000007930
Ring finger protein 7.
    
 0.726
ENSGMOP00000004325
NEDD8 ubiquitin like modifier, like.
    
  0.720
ENSGMOP00000001087
COMM domain containing 8.
   
  0.715
ENSGMOP00000006000
Phosphoinositide kinase, FYVE finger containing.
    
 0.714
asb7
Ankyrin repeat and SOCS box containing 7.
  
 
0.703
CUL5
Cullin 5.
    
 0.698
ENSGMOP00000015512
annotation not available
    
 0.698
ENSGMOP00000015767
Copper metabolism (Murr1) domain containing 1.
    
  0.696
ENSGMOP00000008908
COMM domain containing 4.
    
 0.683
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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