STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000004417Regulatory factor X7b. (1330 aa)    
Predicted Functional Partners:
ENSGMOP00000021929
Regulatory factor X-associated protein.
    
 0.904
ENSGMOP00000017641
annotation not available
   
 0.874
ENSGMOP00000008013
Regulatory factor X-associated ankyrin-containing protein.
    
 0.823
ENSGMOP00000013790
ATR serine/threonine kinase.
    
 
 0.802
ENSGMOP00000000317
Ankyrin repeat, family A (RFXANK-like), 2.
   
 0.720
ENSGMOP00000001536
Doublecortin-like kinase 1b.
     
 0.645
ENSGMOP00000006603
Doublecortin-like kinase 1a.
     
 0.645
ENSGMOP00000011393
Tonsoku-like, DNA repair protein.
    
  0.630
ENSGMOP00000020473
Transmembrane 7 superfamily member 3.
   
  
 0.518
ENSGMOP00000011706
Family with sequence similarity 89 member B.
      
 0.517
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.