STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxd4Homeobox D4. (238 aa)    
Predicted Functional Partners:
ENSGMOP00000004492
Homeobox D3a.
  
  
0.960
ENSGMOP00000010553
annotation not available
   
 
0.777
hoxc4
Homeobox C4.
  
 
0.771
ENSGMOP00000010558
Homeobox B4a.
  
  
0.745
ENSGMOP00000019226
Homeobox C6a.
   
  
0.733
ENSGMOP00000020602
annotation not available
  
 
0.732
LOC115535582
Homeobox protein Hox-A4.
  
 
0.730
ENSGMOP00000003354
Homeobox B5b.
  
 
0.729
ENSGMOP00000008693
annotation not available
   
 
0.722
ENSGMOP00000019243
annotation not available
   
  
0.712
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.