STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kctd6Potassium channel tetramerization domain containing 6. (237 aa)    
Predicted Functional Partners:
CUL3
Cullin-3-like.
    
 0.903
ENSGMOP00000018480
Cullin 3b.
    
 0.903
ENSGMOP00000004304
Ubiquitin-conjugating enzyme E2F (putative).
    
  0.702
ENSGMOP00000009976
BTB (POZ) domain containing 6b.
    
 0.702
ube2m
Ubiquitin conjugating enzyme E2 M.
    
  0.702
ENSGMOP00000015767
Copper metabolism (Murr1) domain containing 1.
     
 0.639
ENSGMOP00000012275
Kelch-like family member 22.
    
 0.630
KLHL11
Kelch like family member 11.
     
 0.620
GAN
Gigaxonin.
    
  0.620
ENSGMOP00000002438
Kelch repeat and BTB (POZ) domain containing 8.
    
  0.620
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.